Atlas, Allan W. 1985. Music at the Aragonese Court of Naples.  Cambridge.

Atlas, Allan W. 1983. The Foligno Fragment: Another Source from FifteenthCentury Naples. Datierung und Filiation von Musikhandschriften der Josquin-Zeit, Wolfenbütteler Forschungen, vol. 26.  Wiesbaden.

Atlas, Allan W. 1981. Conflicting Attributions in Italian Sources of the Franco-Netherlandish Chanson, c. 1465-c. 1505: A Progress Report on a New Hypothesis. Music in Medieval and Early Modern Europe: Patronage, Sources and Texts,  Cambridge.

Atlas, Allan W. 1981. Review of Perkins, Leeman L: and Garey, Howard (eds.): "The Mellon Chansonnier" (New Haven and London, 1979). Journal of the American Musicological Society, 34: 132ff.

Atlas, Allan W (editor). 1981. Robert Morton: The Collected Works. Masters and Monuments of the Renaissance, vol. 2.  New York.

Atlas, Allan W. 1981. The Foligno fragment: another source for 15th century. Meeting of the American Musicological Society, .

Atlas, Allan W. 1978. La provenienza del manoscritto Berlin 78.C.28 Firenze o Napoli? Revista Italiana di Musicologia, 13, no. 1: 10ff.

Atlas, Allan W. 1977. The Accademia degli Unisoni, a music Academy in Renaissance Perugia. A Musical Offering: Essays in Honor of Martin Bernstein, 5-23. New York.

Atlas, Allan W. 1977. On the Neapolitan Provenance of the Manuscript Perugia, Biblioteca Comunale Augusta, 431 (G 20). Musica Disciplina, 31: 45ff.

Atlas, Allan W. 1976. The Cappella Giulia chansonnier. (Rome, Biblioteca Apostolica Vaticana, CG. XII-27). Musicological Studies, vol. XXVII, 1-2.  Brooklyn.

Warren, Charles W. 1976. Punctus organi and Cantus coronatus in the Music of Dufay. Papers Read at the Dufay Quincentenary Conference, Brooklyn College, December 6-7, 1974, edited by Charles W. Warren, 128-43. Brooklyn.

Atlas, Allan W. 1975-6. The Cappella Giulia Chansonnier (Rome, Biblioteca Apostolica Vaticana, C. G.XIII.27). Musicological Studies, vol. 27.  Brooklyn.

Atlas, Allan W. 1974. Heinrich Isaac's Palle, Palle: A New Interpretation. Analecta Musicologica XIV, Analecta Musicologica, vol. XIV. 

Atlas, Allan W. 1974. A Note on Isaac's Quis Dabit Capiti Meo Aquam. Journal of the American Musicological Society, 27: 103ff.

Atlas, Allan W. 1971. Rome, Biblioteca Apostolica Vaticana, Cappella Giulia XIII. 27, and the Dissemination of the Franco-Netherlandish Chanson in Italy, c. 1460-c. 1530. New York University, Unpublished Ph.D. dissertation.

Atlas, Allan W. 1971. Some 18th-century transcriptions of 15th-century chansons. Journal of the American Musicological Society, 24: 100ff.